STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO54384.1Conserved hypothetical protein; Similar to GP:16505351, and GP:16505351; identified by sequence similarity; putative. (312 aa)    
Predicted Functional Partners:
AAO54383.1
Conserved hypothetical protein; Similar to GP:16505352; identified by sequence similarity; putative.
 
     0.940
AAO54394.1
Conserved hypothetical protein; Similar to GP:16505348, and GP:16505348; identified by sequence similarity; putative.
 
     0.798
AAO54395.1
Conserved hypothetical protein; Similar to GP:16505346, and GP:16505346; identified by sequence similarity; putative.
 
     0.798
AAO54396.1
Conserved hypothetical protein; Similar to GP:18077178, and GP:16505345; identified by sequence similarity; putative.
 
     0.798
AAO54397.1
Conserved hypothetical protein; Similar to GP:18077179, and GP:16505344; identified by sequence similarity; putative.
 
     0.798
AAO54398.1
Conserved hypothetical protein; Similar to GP:18077180, and GP:16505343; identified by sequence similarity; putative.
 
     0.798
AAO54414.1
Conserved hypothetical protein; Similar to GP:18077176, and GP:18077176; identified by sequence similarity; putative.
 
     0.798
AAO54385.1
Conserved hypothetical protein; Similar to GP:21108525; identified by sequence similarity; putative.
       0.795
AAO54415.1
Conserved domain protein; See PMID:20190049 for expression data; similar to GP:18077177, and GP:18077177; identified by sequence similarity; putative.
 
     0.794
AAO54371.1
Conserved hypothetical protein; Similar to GP:19908432, and GP:19908432; identified by sequence similarity; putative.
 
     0.774
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.