STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAGlutaminase, putative; Similar to SP:P77470, SP:P37828, and PID:901847; identified by sequence similarity; putative; Belongs to the glutaminase family. (302 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit; See PMID:20190049 for expression data.
     
 0.947
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.936
AAO58445.1
Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.911
glnA-1
Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.
    
 0.910
AAO55439.1
Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.
    
 0.910
AAO58735.1
Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.
    
 0.910
AAO58736.1
Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.
    
 0.910
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.905
gltD
Glutamate synthase, small subunit; See PMID:20190049 for expression data.
     
 0.904
AAO57226.1
Conserved protein of unknown function; Identified by match to PFAM protein family HMM PF02812; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02812.
     
 0.902
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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