STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
folE2Conserved protein of unknown function; Converts GTP to 7,8-dihydroneopterin triphosphate. (301 aa)    
Predicted Functional Partners:
AAO56908.1
6-pyruvoyl tetrahydrobiopterin synthase, putative; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00039.
    
 0.928
AAO56084.1
Carbonic anhydrase-related protein; See PMID:20190049 for expression data; similar to GP:6127222, and SP:P40881; identified by sequence similarity; putative.
  
  
 0.913
folE-1
GTP cyclohydrolase I; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01227.
     
 0.912
folE-2
GTP cyclohydrolase I; See PMID:20190049 for expression data.
     
 0.912
folB-2
Dihydroneopterin aldolase; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00525.
    
 0.908
ribBA-1
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.906
ribBA-2
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
     
 0.906
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
     
 0.901
phoD
Alkaline phosphatase D; Similar to GP:6469271, and SP:P42251; identified by sequence similarity; putative.
     
  0.900
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
     
  0.900
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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