STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAO57064.1HAD-superfamily hydrolase; See PMID:20190049 for expression data; similar to GP:3785998; identified by sequence similarity; putative. (218 aa)    
Predicted Functional Partners:
AAO58872.1
HAD-superfamily hydrolase; See PMID:20190049 for expression data; similar to GP:7295702; identified by sequence similarity; putative.
  
   
 0.699
AAO53822.1
Hydrolase, haloacid dehalogenase-like family; Similar to GP:1518395; identified by sequence similarity; putative.
 
   
 0.676
AAO54510.1
Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9950959; identified by sequence similarity; putative.
  
    0.550
AAO55562.1
Transporter, putative.
 
  
 0.539
rarD-2
rarD protein; Similar to GP:2997760; identified by sequence similarity; putative.
       0.538
AAO56261.1
Alpha-amylase family protein; Similar to GP:1536814; identified by sequence similarity; putative.
 
  
 0.512
AAO57063.1
Transporter, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03222.
  
    0.499
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
    0.405
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.