STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase; Similar to SP:O34347; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:O34347, identified by sequence similarity, putative; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (405 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase; See PMID:20190049 for expression data.
 
 
 0.998
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
 
 
 0.996
carB
Carbamoyl-phosphate synthase, large subunit; See PMID:20190049 for expression data.
 
 0.992
argA
N-acetylglutamate synthase; See PMID:20190049 for expression data; similar to SP:P08205, GB:M23419, GB:U17969, SP:P10159, PID:181997, and PID:602245; identified by sequence similarity; putative.
  
  
 0.961
argE-1
Acetylornithine deacetylase; Similar to SP:P23908; identified by sequence similarity; putative.
  
 0.960
argE-2
Acetylornithine deacetylase; See PMID:20190049 for expression data; similar to GP:8671268, and SP:P23908; identified by sequence similarity; putative.
  
 0.960
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
  
 0.955
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.954
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.943
carA
Carbamoyl-phosphate synthase, small subunit; See PMID:20190049 for expression data; Belongs to the CarA family.
 
 
 0.938
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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