STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metN-1D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (343 aa)    
Predicted Functional Partners:
metI-1
D-methionine ABC transporter, permease protein; See PMID:20190049 for expression data.
 
 0.999
metQ-1
D-methionine-binding lipoprotein MetQ; See PMID:20190049 for expression data; similar to GP:15158732, and SP:P28635; identified by sequence similarity; putative.
 
 0.993
metI-2
D-methionine ABC transporter, permease protein; See PMID:20190049 for expression data.
 
 0.991
AAO58642.1
Lipoprotein, NLPA family.
 
 0.986
metQ-2
D-methionine-binding lipoprotein MetQ; See PMID:20190049 for expression data.
 
 0.986
metN-2
D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
  
  
 
0.907
AAO58616.1
Conserved protein of unknown function; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01739.
       0.628
metF
5,10-methylenetetrahydrofolate reductase; See PMID:20190049 for expression data; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.503
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.480
AAO58612.1
Monooxygenase, DszA family; See PMID:20190049 for expression data; similar to SP:P54995; identified by sequence similarity; putative.
  
    0.411
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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