STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTW10_12680Unannotated protein. (536 aa)    
Predicted Functional Partners:
BTW10_12685
Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
 0.992
BTW10_12675
Unannotated protein.
 
  
 0.982
BTW10_13820
Unannotated protein; Belongs to the precorrin methyltransferase family.
     
 0.896
BTW10_14410
Unannotated protein.
     
 0.896
hemE
Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
     
 0.892
hemC
Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 
 0.887
BTW10_12715
Unannotated protein.
 
    0.780
BTW10_13605
Unannotated protein.
  
     0.706
lolB
Unannotated protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
     0.700
BTW10_07240
Unannotated protein.
  
     0.698
Your Current Organism:
Chromohalobacter japonicus
NCBI taxonomy Id: 223900
Other names: C. japonicus, CCM 7416, CECT 7219, Chromohalobacter japonicus Sanchez-Porro et al. 2007, Chromohalobacter sp. 43, strain 43
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