Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| citA | citZ | BSU09440 | BSU29140 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | 0.839 |
| citA | fumC | BSU09440 | BSU33040 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | 0.971 |
| citA | gabD | BSU09440 | BSU03910 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate | 0.862 |
| citA | mdh | BSU09440 | BSU29120 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate | 0.973 |
| citA | mmgD | BSU09440 | BSU24140 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | 2-methylcitrate synthase/citrate synthase III; Involved in both the tricarboxylic acid (TCA) and methylcitric acid cycles . Has both 2-methylcitrate synthase and citrate synthase activities. Catalyzes the condensation of propionyl-CoA and oxaloacetate to yield 2-methylcitrate (2-MC) and CoA, and the condensation of acetyl-CoA and oxaloacetate to yield citrate and CoA . Has 2.3-fold higher activity as a 2-methylcitrate synthase . Catalyzes the formation of either (2S,3R)- or (2R,3S)-2-methylcitrate | 0.832 |
| citA | sdhA | BSU09440 | BSU28440 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate dehydrogenase flavoprotein subunit; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme | 0.851 |
| citA | sdhB | BSU09440 | BSU28430 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate dehydrogenase / fumarate reductase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family | 0.763 |
| citA | sdhC | BSU09440 | BSU28450 | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate dehydrogenase / fumarate reductase, cytochrome b subunit; Di-heme cytochrome of the succinate dehydrogenase complex | 0.614 |
| citZ | citA | BSU29140 | BSU09440 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | 0.839 |
| citZ | fumC | BSU29140 | BSU33040 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | 0.976 |
| citZ | gabD | BSU29140 | BSU03910 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate | 0.855 |
| citZ | mdh | BSU29140 | BSU29120 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate | 0.995 |
| citZ | mmgD | BSU29140 | BSU24140 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | 2-methylcitrate synthase/citrate synthase III; Involved in both the tricarboxylic acid (TCA) and methylcitric acid cycles . Has both 2-methylcitrate synthase and citrate synthase activities. Catalyzes the condensation of propionyl-CoA and oxaloacetate to yield 2-methylcitrate (2-MC) and CoA, and the condensation of acetyl-CoA and oxaloacetate to yield citrate and CoA . Has 2.3-fold higher activity as a 2-methylcitrate synthase . Catalyzes the formation of either (2S,3R)- or (2R,3S)-2-methylcitrate | 0.836 |
| citZ | sdhA | BSU29140 | BSU28440 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate dehydrogenase flavoprotein subunit; Evidence 2a: Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme | 0.850 |
| citZ | sdhB | BSU29140 | BSU28430 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate dehydrogenase / fumarate reductase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family | 0.802 |
| citZ | sdhC | BSU29140 | BSU28450 | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | Succinate dehydrogenase / fumarate reductase, cytochrome b subunit; Di-heme cytochrome of the succinate dehydrogenase complex | 0.638 |
| fumC | citA | BSU33040 | BSU09440 | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | Citrate synthase i; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | 0.971 |
| fumC | citZ | BSU33040 | BSU29140 | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | Citrate synthase ii; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect | 0.976 |
| fumC | gabD | BSU33040 | BSU03910 | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate | 0.855 |
| fumC | mdh | BSU33040 | BSU29120 | Fumarate hydratase, class ii; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate | 0.995 |
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