STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yonTHypothetical protein; SPBc2 prophage-derived uncharacterized protein YonT; Evidence 5: No homology to any previously reported sequences (58 aa)    
Predicted Functional Partners:
yoyJ
Hypothetical protein; Uncharacterized membrane protein YoyJ; Evidence 5: No homology to any previously reported sequences
     
 0.979
txpA
Conserved unknown protein (fragment); Toxic component of a type I toxin-antitoxin (TA) system . Overexpression of txpA causes cell lysis; the TxpA protein has been suggested to act on the cell membrane or might possibly block cell wall synthesis . Overexpression in E.coli is not toxic
      
 0.957
bsrG
Phage toxin type I toxin-antitoxin system; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type m: membrane component
      
 0.935
sscA
Spore protein involved in the assembly of several components of the spore coat, including CotB, CotG and CotH, and in spore germination
      
 0.910
yonU
Hypothetical protein; SPBc2 prophage-derived uncharacterized protein YonU; Evidence 5: No homology to any previously reported sequences
     
 0.905
yonV
Conserved hypothetical protein; SPBc2 prophage-derived uncharacterized protein YonV; Evidence 4: Homologs of previously reported genes of unknown function
     
 0.883
yonS
SPBc2 prophage-derived uncharacterized lipoprotein YonS; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme
     
 0.861
yonX
Conserved hypothetical protein; SPBc2 prophage-derived uncharacterized protein YonX; Evidence 4: Homologs of previously reported genes of unknown function
     
 0.682
yqaM
Putative replication-related atpase; To B.subtilis YqxC and T.hyodysenteriae hemolysin TlyA
      
 0.650
yqaH
Hypothetical protein; Uncharacterized protein YqaH; Evidence 5: No homology to any previously reported sequences
      
 0.650
Your Current Organism:
Bacillus subtilis
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.