Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
yraI | yraJ | BSU26930 | BSU26920 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraJ. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraI. | 0.855 |
yraI | ysxC | BSU26930 | BSU28190 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraJ. | GTPase involved in ribosome 50S subunit assembly; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.722 |
yraJ | yraI | BSU26920 | BSU26930 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraI. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraJ. | 0.855 |
yraJ | ysxC | BSU26920 | BSU28190 | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraI. | GTPase involved in ribosome 50S subunit assembly; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.722 |
ysxC | yraI | BSU28190 | BSU26930 | GTPase involved in ribosome 50S subunit assembly; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraJ. | 0.722 |
ysxC | yraJ | BSU28190 | BSU26920 | GTPase involved in ribosome 50S subunit assembly; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | Conserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function; To B.subtilis YraI. | 0.722 |