STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcsACellulose synthase catalytic subunit. (759 aa)    
Predicted Functional Partners:
aq_1400
Hypothetical protein.
 
 0.997
aq_1403
Putative protein.
 
 
 0.976
galF
UDP-glucose pyrophosphorylase.
  
 
 0.920
celY
Endoglucanase fragment; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
  
 0.865
aq_1185
Putative protein.
  
 
 0.850
aq_1405
Putative protein.
       0.773
aq_027
Hypothetical protein.
 
  
 0.662
rodA
Rod shape determining protein RodA; Belongs to the SEDS family.
      
 0.615
aq_1442
Hypothetical protein.
  
  
 0.611
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
      
 0.602
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.