STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aq_1806Putative protein. (206 aa)    
Predicted Functional Partners:
cyc
Cytochrome c.
  
 0.997
soxF
Rieske-I iron sulfur protein.
 
 0.996
aq_1807
Putative protein.
 
  
 0.995
aq_1809
Putative protein.
 
  
 0.995
aq_1810
Putative protein.
 
  
 0.994
petA
Rieske-I iron sulfur protein.
  
 0.993
soxB
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
 
 0.993
dmsB1
DMSO reductase chain B.
  
 0.990
dmsA
DMSO reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.989
petB
Cytochrome b.
  
 0.986
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.