Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_1262 | aq_1483 | aq_1262 | aq_1483 | Putative protein. | Putative protein. | 0.624 |
aq_1262 | aq_1989 | aq_1262 | aq_1989 | Putative protein. | Putative protein. | 0.814 |
aq_1262 | pal | aq_1262 | aq_2147 | Putative protein. | Peptidoglycan associated lipoprotein. | 0.957 |
aq_1483 | aq_1262 | aq_1483 | aq_1262 | Putative protein. | Putative protein. | 0.624 |
aq_1483 | aq_1585 | aq_1483 | aq_1585 | Putative protein. | Hypothetical protein. | 0.911 |
aq_1483 | pal | aq_1483 | aq_2147 | Putative protein. | Peptidoglycan associated lipoprotein. | 0.616 |
aq_157 | aq_1989 | aq_157 | aq_1989 | Putative protein; Belongs to the Skp family. | Putative protein. | 0.565 |
aq_157 | omp | aq_157 | aq_1300 | Putative protein; Belongs to the Skp family. | Outer membrane protein. | 0.726 |
aq_157 | pal | aq_157 | aq_2147 | Putative protein; Belongs to the Skp family. | Peptidoglycan associated lipoprotein. | 0.911 |
aq_1585 | aq_1483 | aq_1585 | aq_1483 | Hypothetical protein. | Putative protein. | 0.911 |
aq_1585 | omp | aq_1585 | aq_1300 | Hypothetical protein. | Outer membrane protein. | 0.625 |
aq_1585 | pal | aq_1585 | aq_2147 | Hypothetical protein. | Peptidoglycan associated lipoprotein. | 0.697 |
aq_1989 | aq_1262 | aq_1989 | aq_1262 | Putative protein. | Putative protein. | 0.814 |
aq_1989 | aq_157 | aq_1989 | aq_157 | Putative protein. | Putative protein; Belongs to the Skp family. | 0.565 |
aq_1989 | omp | aq_1989 | aq_1300 | Putative protein. | Outer membrane protein. | 0.927 |
aq_1989 | pal | aq_1989 | aq_2147 | Putative protein. | Peptidoglycan associated lipoprotein. | 0.590 |
fbp | pal | aq_1790 | aq_2147 | Hypothetical protein; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | Peptidoglycan associated lipoprotein. | 0.735 |
fbp | pfkA | aq_1790 | aq_1708 | Hypothetical protein; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). | Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.975 |
hdrC | pal | aq_398 | aq_2147 | Heterodisulfide reductase subunit C. | Peptidoglycan associated lipoprotein. | 0.602 |
omp | aq_157 | aq_1300 | aq_157 | Outer membrane protein. | Putative protein; Belongs to the Skp family. | 0.726 |
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