Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
abcT2 | aq_2165 | aq_620 | aq_2165 | ABC transporter. | Putative protein. | 0.989 |
abcT2 | aq_621 | aq_620 | aq_621 | ABC transporter. | Hypothetical protein. | 0.999 |
abcT2 | scbA | aq_620 | aq_2166 | ABC transporter. | Adhesion protein; Belongs to the bacterial solute-binding protein 9 family. | 0.939 |
abcT2 | yfeA | aq_620 | aq_619 | ABC transporter. | Adhesion B precursor. | 0.998 |
aq_2164 | aq_2165 | aq_2164 | aq_2165 | Putative protein. | Putative protein. | 0.773 |
aq_2164 | aq_2168 | aq_2164 | aq_2168 | Putative protein. | Putative protein. | 0.757 |
aq_2164 | scbA | aq_2164 | aq_2166 | Putative protein. | Adhesion protein; Belongs to the bacterial solute-binding protein 9 family. | 0.773 |
aq_2165 | abcT2 | aq_2165 | aq_620 | Putative protein. | ABC transporter. | 0.989 |
aq_2165 | aq_2164 | aq_2165 | aq_2164 | Putative protein. | Putative protein. | 0.773 |
aq_2165 | aq_2168 | aq_2165 | aq_2168 | Putative protein. | Putative protein. | 0.945 |
aq_2165 | aq_621 | aq_2165 | aq_621 | Putative protein. | Hypothetical protein. | 0.426 |
aq_2165 | scbA | aq_2165 | aq_2166 | Putative protein. | Adhesion protein; Belongs to the bacterial solute-binding protein 9 family. | 0.986 |
aq_2165 | yfeA | aq_2165 | aq_619 | Putative protein. | Adhesion B precursor. | 0.840 |
aq_2168 | aq_2164 | aq_2168 | aq_2164 | Putative protein. | Putative protein. | 0.757 |
aq_2168 | aq_2165 | aq_2168 | aq_2165 | Putative protein. | Putative protein. | 0.945 |
aq_2168 | scbA | aq_2168 | aq_2166 | Putative protein. | Adhesion protein; Belongs to the bacterial solute-binding protein 9 family. | 0.945 |
aq_621 | abcT2 | aq_621 | aq_620 | Hypothetical protein. | ABC transporter. | 0.999 |
aq_621 | aq_2165 | aq_621 | aq_2165 | Hypothetical protein. | Putative protein. | 0.426 |
aq_621 | scbA | aq_621 | aq_2166 | Hypothetical protein. | Adhesion protein; Belongs to the bacterial solute-binding protein 9 family. | 0.940 |
aq_621 | yfeA | aq_621 | aq_619 | Hypothetical protein. | Adhesion B precursor. | 0.976 |
page 1 of 3