Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aq_1409 | aq_1852 | aq_1409 | aq_1852 | Putative protein. | Hypothetical protein. | 0.416 |
aq_1409 | ogg | aq_1409 | aq_251 | Putative protein. | Hypothetical protein; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites) (By similarity); Belongs to the type-2 OGG1 family. | 0.477 |
aq_1852 | aq_1409 | aq_1852 | aq_1409 | Hypothetical protein. | Putative protein. | 0.416 |
aq_1852 | lig | aq_1852 | aq_1394 | Hypothetical protein. | DNA ligase (ATP dependent); DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.463 |
aq_1852 | ogg | aq_1852 | aq_251 | Hypothetical protein. | Hypothetical protein; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites) (By similarity); Belongs to the type-2 OGG1 family. | 0.635 |
aq_1852 | topG2 | aq_1852 | aq_886 | Hypothetical protein. | Reverse gyrase; Modifies the topological state of DNA by introducing positive supercoils in an ATP-dependent process. It cleaves transiently a single DNA strand and remains covalently bound to the 5' DNA end through a tyrosine residue. May be involved in rewinding the DNA strands in the regions of the chromosome that have opened up to allow transcription or replication; In the C-terminal section; belongs to the prokaryotic type I/III topoisomerase family. | 0.453 |
aq_246 | aq_250 | aq_246 | aq_250 | Putative protein. | Putative protein. | 0.760 |
aq_246 | aq_252 | aq_246 | aq_252 | Putative protein. | Putative protein. | 0.591 |
aq_246 | gatA | aq_246 | aq_247 | Putative protein. | glutamyl-tRNA (Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln) (By similarity). | 0.802 |
aq_246 | kdtB | aq_246 | aq_253 | Putative protein. | Lipopolysaccharide core biosynthesis protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.607 |
aq_246 | ogg | aq_246 | aq_251 | Putative protein. | Hypothetical protein; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites) (By similarity); Belongs to the type-2 OGG1 family. | 0.615 |
aq_250 | aq_246 | aq_250 | aq_246 | Putative protein. | Putative protein. | 0.760 |
aq_250 | aq_252 | aq_250 | aq_252 | Putative protein. | Putative protein. | 0.603 |
aq_250 | gatA | aq_250 | aq_247 | Putative protein. | glutamyl-tRNA (Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln) (By similarity). | 0.782 |
aq_250 | kdtB | aq_250 | aq_253 | Putative protein. | Lipopolysaccharide core biosynthesis protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.603 |
aq_250 | ogg | aq_250 | aq_251 | Putative protein. | Hypothetical protein; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites) (By similarity); Belongs to the type-2 OGG1 family. | 0.628 |
aq_252 | aq_246 | aq_252 | aq_246 | Putative protein. | Putative protein. | 0.591 |
aq_252 | aq_250 | aq_252 | aq_250 | Putative protein. | Putative protein. | 0.603 |
aq_252 | gatA | aq_252 | aq_247 | Putative protein. | glutamyl-tRNA (Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln) (By similarity). | 0.591 |
aq_252 | kdtB | aq_252 | aq_253 | Putative protein. | Lipopolysaccharide core biosynthesis protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.773 |
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