STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcT8ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (224 aa)    
Predicted Functional Partners:
aq_296
Hypothetical protein.
 0.999
aq_1585
Hypothetical protein.
 0.992
aq_1483
Putative protein.
   
 
 0.914
aq_294
Putative protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.906
abcT6
ABC transporter.
  
  
 
0.906
oppC
Oligopeptide transport system permease.
 
 
    0.800
aq_293
Putative protein.
       0.773
aq_291
Hypothetical protein.
  
    0.759
modC
Molybdenum transport system permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.681
amiB
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.622
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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