Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
abcT6 | abcT8 | aq_417 | aq_297 | ABC transporter. | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.906 |
abcT6 | aq_1483 | aq_417 | aq_1483 | ABC transporter. | Putative protein. | 0.914 |
abcT6 | aq_1585 | aq_417 | aq_1585 | ABC transporter. | Hypothetical protein. | 0.992 |
abcT6 | aq_294 | aq_417 | aq_294 | ABC transporter. | Putative protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.554 |
abcT6 | aq_296 | aq_417 | aq_296 | ABC transporter. | Hypothetical protein. | 0.995 |
abcT8 | abcT6 | aq_297 | aq_417 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | ABC transporter. | 0.906 |
abcT8 | amiB | aq_297 | aq_1681 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | N-acetylmuramoyl-L-alanine amidase. | 0.622 |
abcT8 | aq_1483 | aq_297 | aq_1483 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Putative protein. | 0.914 |
abcT8 | aq_1585 | aq_297 | aq_1585 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Hypothetical protein. | 0.992 |
abcT8 | aq_291 | aq_297 | aq_291 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Hypothetical protein. | 0.759 |
abcT8 | aq_293 | aq_297 | aq_293 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Putative protein. | 0.773 |
abcT8 | aq_294 | aq_297 | aq_294 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Putative protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.906 |
abcT8 | aq_296 | aq_297 | aq_296 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Hypothetical protein. | 0.999 |
abcT8 | modC | aq_297 | aq_086 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Molybdenum transport system permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.681 |
abcT8 | oppC | aq_297 | aq_1509 | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Oligopeptide transport system permease. | 0.800 |
amiB | abcT8 | aq_1681 | aq_297 | N-acetylmuramoyl-L-alanine amidase. | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.622 |
amiB | aq_1483 | aq_1681 | aq_1483 | N-acetylmuramoyl-L-alanine amidase. | Putative protein. | 0.906 |
aq_1483 | abcT6 | aq_1483 | aq_417 | Putative protein. | ABC transporter. | 0.914 |
aq_1483 | abcT8 | aq_1483 | aq_297 | Putative protein. | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.914 |
aq_1483 | amiB | aq_1483 | aq_1681 | Putative protein. | N-acetylmuramoyl-L-alanine amidase. | 0.906 |
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