STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrD4Cation efflux (AcrB/AcrD/AcrF family); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1000 aa)    
Predicted Functional Partners:
czcB2
Cation efflux system (czcB-like); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.877
aq_294
Putative protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.859
acrE
Acriflavin resistance protein AcrE; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.855
czcB3
Cation efflux system (czcB-like); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.833
czcB1
Cation efflux system (czcB-like); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.746
aq_986
Putative protein.
  
 
 0.692
aq_1332
Hypothetical protein.
 
   0.611
yajC
Hypothetical protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.604
aq_788
Putative protein.
       0.555
mqnC
Hypothetical protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).
       0.521
Your Current Organism:
Aquifex aeolicus
NCBI taxonomy Id: 224324
Other names: A. aeolicus VF5, Aquifex aeolicus VF5, Aquifex aeolicus str. VF5
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