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rtcA protein (Archaeoglobus fulgidus) - STRING interaction network
"rtcA" - RNA 3'-terminal-phosphate cyclase in Archaeoglobus fulgidus
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rtcARNA 3’-terminal-phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (By similarity) (328 aa)    
Predicted Functional Partners:
nep1
Ribosome biogenesis protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA (By similarity) (219 aa)
   
  0.996
AF_1106
Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome (153 aa)
     
 
  0.989
rps4e
30S ribosomal protein S4e (235 aa)
     
    0.985
rps8e
30S ribosomal protein S8e (125 aa)
     
  0.983
rps4
30S ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (172 aa)
     
  0.982
AF_2088
Hypothetical protein (261 aa)
     
  0.979
rps17p
30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (111 aa)
     
  0.976
rps6e
30S ribosomal protein S6e (129 aa)
     
    0.975
rps7
30S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (194 aa)
     
    0.974
rps28e
30S ribosomal protein S28e (71 aa)
     
    0.974
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus, A. fulgidus DSM 4304, Archaeoglobus fulgidus, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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