Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AND87574.1 | nodD2 | AAV28_06945 | AAV28_06940 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). | 0.562 |
| AND91496.1 | nodD2 | AAV28_29695 | AAV28_06940 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). | 0.547 |
| nodA | nodC | AAV28_06960 | AAV28_06970 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | 0.943 |
| nodA | nodD2 | AAV28_06960 | AAV28_06940 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). | 0.640 |
| nodA | nodQ | AAV28_06960 | AAV28_04325 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate. | 0.511 |
| nodA | nodU | AAV28_06960 | AAV28_06980 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | Nodulation protein NodU; Involved in 6-O-carbamoylation of Nod-factors. | 0.912 |
| nodA | nodY | AAV28_06960 | AAV28_06955 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | NodY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.851 |
| nodA | nodZ | AAV28_06960 | AAV28_07010 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | Nodulation protein NodZ; Fucosyltransferase which adds the fucose moiety of the nod factor on its terminal reducing N-acetylglucosamine end. Uses GDP- fucose as the donor group. | 0.759 |
| nodA | nolN | AAV28_06960 | AAV28_07000 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.738 |
| nodA | nolO | AAV28_06960 | AAV28_07005 | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | Nodulation protein; Involved in 6-O-carbamoylation of Nod-factors. | 0.758 |
| nodC | nodA | AAV28_06970 | AAV28_06960 | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | 0.943 |
| nodC | nodD2 | AAV28_06970 | AAV28_06940 | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). | 0.750 |
| nodC | nodU | AAV28_06970 | AAV28_06980 | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | Nodulation protein NodU; Involved in 6-O-carbamoylation of Nod-factors. | 0.924 |
| nodC | nodY | AAV28_06970 | AAV28_06955 | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | NodY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
| nodC | nodZ | AAV28_06970 | AAV28_07010 | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | Nodulation protein NodZ; Fucosyltransferase which adds the fucose moiety of the nod factor on its terminal reducing N-acetylglucosamine end. Uses GDP- fucose as the donor group. | 0.756 |
| nodC | nolN | AAV28_06970 | AAV28_07000 | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.799 |
| nodC | nolO | AAV28_06970 | AAV28_07005 | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. | Nodulation protein; Involved in 6-O-carbamoylation of Nod-factors. | 0.804 |
| nodD2 | AND87574.1 | AAV28_06940 | AAV28_06945 | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| nodD2 | AND91496.1 | AAV28_06940 | AAV28_29695 | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.547 |
| nodD2 | nodA | AAV28_06940 | AAV28_06960 | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. | 0.640 |
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