STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND92763.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1018 aa)    
Predicted Functional Partners:
AND88095.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.859
AND88681.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.806
AND90803.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.793
AND91184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.778
AND94591.1
Guanylyl cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.777
AND87295.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.771
AND88130.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.771
AND90265.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.768
AND88328.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.765
AND93512.1
Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.762
Your Current Organism:
Bradyrhizobium diazoefficiens
NCBI taxonomy Id: 224911
Other names: B. diazoefficiens USDA 110, Bradyrhizobium diazoefficiens USDA 110, Bradyrhizobium japonicum USDA 110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.