STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND92872.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
AND88095.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.630
AND87078.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.586
AND87227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.586
AND94416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.586
AND87765.1
Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.573
AND94506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.527
AND92637.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.459
AND86904.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.451
AND88436.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.448
AND88681.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.434
Your Current Organism:
Bradyrhizobium diazoefficiens
NCBI taxonomy Id: 224911
Other names: B. diazoefficiens USDA 110, Bradyrhizobium diazoefficiens USDA 110, Bradyrhizobium japonicum USDA 110
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.