STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSYNT_7134Unannotated protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (317 aa)    
Predicted Functional Partners:
TSYNT_5254
Unannotated protein; Purine nucleoside phosphorylase involved in purine salvage.
 
 
 0.932
psuG
Unannotated protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
  
    0.795
TSYNT_6294
Unannotated protein.
   
  
 0.760
TSYNT_9151
Unannotated protein.
 
 
 0.702
TSYNT_7135
Unannotated protein.
       0.675
TSYNT_7153
Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
 0.659
TSYNT_7132
Unannotated protein.
       0.658
TSYNT_5355
Unannotated protein.
 
 
 0.640
TSYNT_6164
Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family.
  
   0.604
TSYNT_9331
Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family.
  
   0.604
Your Current Organism:
Tepidanaerobacter syntrophicus
NCBI taxonomy Id: 224999
Other names: DSM 15584, JCM 12098, NBRC 100060, T. syntrophicus, Tepidanaerobacter syntrophicus Sekiguchi et al. 2006, anaerobic syntrophic bacterium JE, anaerobic syntrophic bacterium JL, anaerobic syntrophic bacterium OL, strain JL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.