STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3YVH6_LOTGIDynein light chain. (107 aa)    
Predicted Functional Partners:
V4A7Q8_LOTGI
Dynein light chain roadblock.
   
 0.808
V4AVC2_LOTGI
Uncharacterized protein.
    
 
 0.755
V4AKY9_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.713
V3ZR43_LOTGI
Uncharacterized protein.
    
 
 0.681
V3Z9K5_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.585
V4B996_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.585
V3ZN72_LOTGI
Uncharacterized protein.
    
 0.581
V3ZHY8_LOTGI
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.567
V3ZG18_LOTGI
Uncharacterized protein.
    
 0.551
V4BM87_LOTGI
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 
  0.527
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.