STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3Z6R9_LOTGIUncharacterized protein. (289 aa)    
Predicted Functional Partners:
V4A9C6_LOTGI
Homeobox domain-containing protein.
    
 
 0.539
V4B9I8_LOTGI
Homeobox domain-containing protein.
    
 
 0.539
V3ZT21_LOTGI
Uncharacterized protein.
    
 
 0.500
V4ALW8_LOTGI
Uncharacterized protein.
    
 
 0.500
V4BY31_LOTGI
BHLH domain-containing protein.
   
  
 0.446
V4BRW4_LOTGI
PHD domain-containing protein.
    
   0.414
V4AJ17_LOTGI
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.408
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.