STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZBJ5_LOTGIApple domain-containing protein. (262 aa)    
Predicted Functional Partners:
V4B982_LOTGI
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.946
V4A8S1_LOTGI
AAA_16 domain-containing protein.
    
 
 0.862
V4ARA7_LOTGI
Uncharacterized protein.
    
 
 0.845
V4B097_LOTGI
UvrD-like helicase C-terminal domain-containing protein.
  
 
 0.838
V4B8U7_LOTGI
Uncharacterized protein.
    
 
 0.827
V3ZYD5_LOTGI
Uncharacterized protein.
   
 
 0.816
V4BFG0_LOTGI
ERCC4 domain-containing protein.
   
 
 0.816
V3ZZV8_LOTGI
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 
 0.797
V4A380_LOTGI
3'-5' exonuclease domain-containing protein.
  
 
 0.797
V3ZT04_LOTGI
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 
 0.778
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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