STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZGE9_LOTGIUncharacterized protein. (221 aa)    
Predicted Functional Partners:
V4AYP6_LOTGI
TFIIB-type domain-containing protein.
   
 0.858
V3Z331_LOTGI
TFIID_20kDa domain-containing protein.
    
 0.849
V4ADU9_LOTGI
Uncharacterized protein.
    
 0.849
V4BCU4_LOTGI
Peptidase_M1 domain-containing protein.
    
 0.849
V4AS75_LOTGI
TAFII55_N domain-containing protein.
    
 0.848
V4BRI6_LOTGI
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.848
V4B3H1_LOTGI
Uncharacterized protein.
    
 0.847
V3Z2I3_LOTGI
Uncharacterized protein.
   
 0.844
V3ZQV9_LOTGI
TAFII28 domain-containing protein.
   
 0.842
V3ZKM9_LOTGI
Uncharacterized protein.
   
 0.839
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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