STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZMZ3_LOTGIUncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (354 aa)    
Predicted Functional Partners:
V3ZWH1_LOTGI
Neur_chan_LBD domain-containing protein.
  
 
  0.565
V3YWI2_LOTGI
Neur_chan_LBD domain-containing protein.
  
     0.523
V4A3I5_LOTGI
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.497
V4A9N2_LOTGI
Neur_chan_memb domain-containing protein.
  
     0.494
V4A3G3_LOTGI
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.486
V4A891_LOTGI
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.482
V3ZGW2_LOTGI
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.481
V4AQ28_LOTGI
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.481
V4CJM7_LOTGI
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.480
V4B3L5_LOTGI
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.473
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.