STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZWJ3_LOTGIUncharacterized protein. (176 aa)    
Predicted Functional Partners:
V4ARF2_LOTGI
Uncharacterized protein.
  
  
 
0.906
V4A0R2_LOTGI
Uncharacterized protein.
     
  0.900
V4CRF4_LOTGI
Uncharacterized protein.
  
 
0.758
V4B5V2_LOTGI
Uncharacterized protein.
    
 
 0.742
V4AG52_LOTGI
PID domain-containing protein.
      
 0.525
V4A973_LOTGI
Importin N-terminal domain-containing protein.
   
 
 0.518
V3ZPS4_LOTGI
RRM domain-containing protein.
  
 
 0.482
V3ZXL2_LOTGI
RRM domain-containing protein.
  
 
 0.481
V4C1G2_LOTGI
Uncharacterized protein.
    
 0.470
V3YY17_LOTGI
Uncharacterized protein.
  
 0.462
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.