STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZXH2_LOTGIUncharacterized protein. (145 aa)    
Predicted Functional Partners:
V3ZDD2_LOTGI
GuKc domain-containing protein.
    
 0.650
V4A6Q9_LOTGI
GuKc domain-containing protein.
    
 0.650
V4A733_LOTGI
Uncharacterized protein.
  
  
 0.634
V3Z678_LOTGI
UPAR/Ly6 domain-containing protein.
  
    0.537
V4AB74_LOTGI
Uncharacterized protein.
      
 0.470
V3Z0U0_LOTGI
Uncharacterized protein.
   
 0.462
V3ZK60_LOTGI
Uncharacterized protein.
   
 0.462
V3ZMP2_LOTGI
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 0.462
V3ZN26_LOTGI
Ca_chan_IQ domain-containing protein.
   
 0.462
V3ZQE9_LOTGI
Uncharacterized protein.
   
 0.462
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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