STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3ZYR1_LOTGIRab-GAP TBC domain-containing protein. (523 aa)    
Predicted Functional Partners:
V4C1E5_LOTGI
Uncharacterized protein.
   
 
 0.581
V4BB91_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.540
V3Z1J1_LOTGI
Uncharacterized protein.
    
   0.534
V4BZW1_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.530
V4CS15_LOTGI
Uncharacterized protein.
   
   0.488
V4API9_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.471
V4C7F6_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.468
V4CMZ7_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.467
V4ASL7_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.441
V4BYL2_LOTGI
Uncharacterized protein.
   
 
 0.404
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.