STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A0Q8_LOTGISenescence domain-containing protein. (380 aa)    
Predicted Functional Partners:
V4CNK7_LOTGI
Uncharacterized protein.
    
 
 0.881
V4B5X5_LOTGI
Uncharacterized protein.
      
 0.668
V4AYG1_LOTGI
Uncharacterized protein.
   
  
 0.650
V3ZUF7_LOTGI
GB1/RHD3-type G domain-containing protein.
      
 0.634
V4ABB1_LOTGI
Spatacsin_C domain-containing protein.
      
 0.613
V3Z9I1_LOTGI
AB hydrolase-1 domain-containing protein.
      
 0.599
V3ZKI0_LOTGI
Uncharacterized protein.
    
 
 0.574
V3ZPU8_LOTGI
Uncharacterized protein.
    
 
 0.574
V3ZNU5_LOTGI
CUE domain-containing protein.
      
 0.470
V3ZY86_LOTGI
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
      
 0.465
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.