STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A7K7_LOTGIEF-hand domain-containing protein. (718 aa)    
Predicted Functional Partners:
V4AJ42_LOTGI
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 
 0.707
V4A469_LOTGI
Uncharacterized protein.
   
  0.702
V3ZYH6_LOTGI
LSM14 domain-containing protein.
   
 
 0.674
V3ZZB8_LOTGI
Uncharacterized protein.
    
 
 0.669
V4AEC6_LOTGI
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.640
V4BLS6_LOTGI
Uncharacterized protein.
   
 
 0.630
V4B3V0_LOTGI
RPOLD domain-containing protein.
   
 0.614
V4AUJ5_LOTGI
Plus3 domain-containing protein.
    
 
 0.575
V4AEU6_LOTGI
Cnd1 domain-containing protein.
   
  
 0.570
V4AAH0_LOTGI
Uncharacterized protein.
   
 
 0.567
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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