STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4A9S8_LOTGIUncharacterized protein. (379 aa)    
Predicted Functional Partners:
V4BDR0_LOTGI
Uncharacterized protein.
    
 
 0.971
V4AE67_LOTGI
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.942
V3ZHJ6_LOTGI
Uncharacterized protein.
   
 
 0.887
V4AGT7_LOTGI
Uncharacterized protein.
    
 0.866
V4AJM7_LOTGI
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.780
V4C0Q6_LOTGI
Uncharacterized protein.
   
 
 0.718
V4BFP0_LOTGI
SAC domain-containing protein.
    
 
 0.716
V4CQV8_LOTGI
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
 
  
 
 0.707
V4BKW3_LOTGI
Uncharacterized protein.
    
 
 0.693
V4C658_LOTGI
Uncharacterized protein.
   
 
 0.687
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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