STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ABF1_LOTGIPPIase cyclophilin-type domain-containing protein. (421 aa)    
Predicted Functional Partners:
V4BMI4_LOTGI
Aha1_N domain-containing protein.
   
 
 0.947
V3ZZ19_LOTGI
CS domain-containing protein.
   
 0.937
V3ZXV5_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
 0.883
V4CIC0_LOTGI
MI domain-containing protein.
   
 0.868
V4AAX5_LOTGI
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 
0.867
V4AAZ0_LOTGI
TPR_REGION domain-containing protein.
  
 
 0.867
V4B6K6_LOTGI
PWI domain-containing protein.
   
 0.863
V4A923_LOTGI
Slu7 domain-containing protein.
   
 0.824
V4B6F1_LOTGI
Uncharacterized protein.
   
 0.795
V3Z7A0_LOTGI
Uncharacterized protein.
   
0.794
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.