STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ABH9_LOTGIUncharacterized protein. (340 aa)    
Predicted Functional Partners:
V4BQV6_LOTGI
Phosphodiesterase delta-like protein; Belongs to the PDE6D/unc-119 family.
    
 
 0.907
V4ALJ0_LOTGI
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.892
V4BEG2_LOTGI
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
 0.892
V3ZX92_LOTGI
Uncharacterized protein.
   
 0.830
V3ZN44_LOTGI
RanGAP1_C domain-containing protein.
   
 
 0.790
V4A4K5_LOTGI
RanBD1 domain-containing protein.
   
 0.778
V3ZJY9_LOTGI
Uncharacterized protein.
    
 
 0.736
V3ZS10_LOTGI
SH3 domain-containing protein.
    
 
 0.687
V4A683_LOTGI
Uncharacterized protein.
   
 
 0.687
V4AG79_LOTGI
Uncharacterized protein.
    
 
 0.684
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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