STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ABW3_LOTGIUncharacterized protein. (374 aa)    
Predicted Functional Partners:
V4AYZ2_LOTGI
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.994
V4BYN6_LOTGI
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.964
V4B166_LOTGI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.952
V4BC89_LOTGI
Cullin domain-containing protein; Belongs to the cullin family.
   
 0.917
V4AJ01_LOTGI
Uncharacterized protein.
   
 0.907
V4BDH9_LOTGI
Uncharacterized protein.
   
 0.907
V3ZVU6_LOTGI
RING-type domain-containing protein.
    
 0.878
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.720
KATNA1
Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
   
 0.710
V4ACA7_LOTGI
Uncharacterized protein.
   
   0.699
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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