STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AEB0_LOTGIEF-hand domain-containing protein. (779 aa)    
Predicted Functional Partners:
V3ZWK7_LOTGI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.592
V4A620_LOTGI
Sec2p domain-containing protein.
    
 0.532
V4BBL7_LOTGI
Uncharacterized protein.
    
 0.532
V4ATG0_LOTGI
Uncharacterized protein.
    
 0.518
V4C658_LOTGI
Uncharacterized protein.
    
 
 0.489
V4A9M3_LOTGI
MAGE domain-containing protein.
      
 0.469
V4ACE9_LOTGI
Sec8_exocyst domain-containing protein.
    
 0.458
V4A6M0_LOTGI
Sec3-PIP2_bind domain-containing protein.
    
 0.450
V3ZU16_LOTGI
Uncharacterized protein.
    
 0.446
V4A0V1_LOTGI
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.441
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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