Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| V3ZW05_LOTGI | V3ZZB8_LOTGI | V3ZW05 | V3ZZB8 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.978 |
| V3ZW05_LOTGI | V4A8E4_LOTGI | V3ZW05 | V4A8E4 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT5. | 0.998 |
| V3ZW05_LOTGI | V4AJ42_LOTGI | V3ZW05 | V4AJ42 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.961 |
| V3ZW05_LOTGI | V4ALE7_LOTGI | V3ZW05 | V4ALE7 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.887 |
| V3ZW05_LOTGI | V4ARM6_LOTGI | V3ZW05 | V4ARM6 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TPR_REGION domain-containing protein. | 0.935 |
| V3ZW05_LOTGI | V4B3V0_LOTGI | V3ZW05 | V4B3V0 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RPOLD domain-containing protein. | 0.999 |
| V3ZW05_LOTGI | V4B4X5_LOTGI | V3ZW05 | V4B4X5 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.998 |
| V3ZW05_LOTGI | V4B5I5_LOTGI | V3ZW05 | V4B5I5 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | S1 domain-containing protein. | 0.998 |
| V3ZW05_LOTGI | V4BFV9_LOTGI | V3ZW05 | V4BFV9 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TFIIS N-terminal domain-containing protein. | 0.874 |
| V3ZW05_LOTGI | V4BLS6_LOTGI | V3ZW05 | V4BLS6 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.995 |
| V3ZZB8_LOTGI | V3ZW05_LOTGI | V3ZZB8 | V3ZW05 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
| V3ZZB8_LOTGI | V4A8E4_LOTGI | V3ZZB8 | V4A8E4 | Uncharacterized protein. | Transcription elongation factor SPT5. | 0.989 |
| V3ZZB8_LOTGI | V4AJ42_LOTGI | V3ZZB8 | V4AJ42 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.998 |
| V3ZZB8_LOTGI | V4ALE7_LOTGI | V3ZZB8 | V4ALE7 | Uncharacterized protein. | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. | 0.949 |
| V3ZZB8_LOTGI | V4ARM6_LOTGI | V3ZZB8 | V4ARM6 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.988 |
| V3ZZB8_LOTGI | V4B3V0_LOTGI | V3ZZB8 | V4B3V0 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.983 |
| V3ZZB8_LOTGI | V4B4X5_LOTGI | V3ZZB8 | V4B4X5 | Uncharacterized protein. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.983 |
| V3ZZB8_LOTGI | V4B5I5_LOTGI | V3ZZB8 | V4B5I5 | Uncharacterized protein. | S1 domain-containing protein. | 0.951 |
| V3ZZB8_LOTGI | V4BFV9_LOTGI | V3ZZB8 | V4BFV9 | Uncharacterized protein. | TFIIS N-terminal domain-containing protein. | 0.956 |
| V3ZZB8_LOTGI | V4BLS6_LOTGI | V3ZZB8 | V4BLS6 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
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