STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ATD7_LOTGIUncharacterized protein. (1332 aa)    
Predicted Functional Partners:
V4C658_LOTGI
Uncharacterized protein.
    
  0.898
V4BV65_LOTGI
Arrestin_C domain-containing protein.
     
 0.601
V4CRV3_LOTGI
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.582
V4AWT0_LOTGI
Sortilin.
     
 0.527
V4AFW8_LOTGI
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
  
 0.521
V3Z8Q5_LOTGI
Uncharacterized protein.
     
 0.428
V4BEI7_LOTGI
ENTH domain-containing protein.
     
 0.428
V3ZA67_LOTGI
Adaptin_N domain-containing protein.
   
 
 0.426
V3ZZ08_LOTGI
Adaptin_N domain-containing protein.
   
 
 0.426
V3ZZ35_LOTGI
Ig-like domain-containing protein.
    
 0.406
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.