STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4ATE6_LOTGISET domain-containing protein. (396 aa)    
Predicted Functional Partners:
V3ZVG7_LOTGI
GOLD domain-containing protein.
 
   
 0.779
V3ZWX9_LOTGI
Glycos_transf_1 domain-containing protein.
 
 
    0.760
V4CR88_LOTGI
MYND-type domain-containing protein.
      
0.597
p63
TAp63alpha.
   
 0.556
V3ZF78_LOTGI
B30.2/SPRY domain-containing protein.
    
 0.551
V3Z4Y7_LOTGI
ANK_REP_REGION domain-containing protein.
    
 0.550
V4A747_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.538
V4CNA0_LOTGI
VEFS-Box domain-containing protein.
    
 0.526
V4AGI2_LOTGI
Protein-histidine N-methyltransferase.
     
 0.517
V3ZSB6_LOTGI
Uncharacterized protein.
    
 0.473
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.