STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AV40_LOTGIN-acetyltransferase domain-containing protein. (532 aa)    
Predicted Functional Partners:
V4B241_LOTGI
Uncharacterized protein.
  
 
 0.998
V4AP53_LOTGI
Uncharacterized protein.
  
  
 0.993
V3ZWW0_LOTGI
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.967
V4AW79_LOTGI
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.952
V3ZF41_LOTGI
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.943
V4AXU0_LOTGI
Uncharacterized protein.
  
 
 0.943
V4B3I1_LOTGI
Uncharacterized protein.
  
 
 0.943
V4A4R9_LOTGI
Aminotran_1_2 domain-containing protein.
  
 
 0.929
V4AU38_LOTGI
Aminotran_1_2 domain-containing protein.
  
 
 0.929
V4ABY1_LOTGI
Aspartate aminotransferase.
     
 0.921
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.