STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AXZ0_LOTGIUncharacterized protein. (383 aa)    
Predicted Functional Partners:
V4ATJ4_LOTGI
Uncharacterized protein.
    
 0.966
V3ZQS6_LOTGI
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
     
 0.952
V4A2G8_LOTGI
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
      
 0.668
V4B6M8_LOTGI
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.635
V3ZX28_LOTGI
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.620
V4AQA5_LOTGI
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
  
 0.601
V3ZKL3_LOTGI
Uncharacterized protein.
      
 0.596
V4B1B9_LOTGI
Uncharacterized protein.
      
 0.596
V4B4Q1_LOTGI
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.587
V4AE67_LOTGI
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
 
    
 0.569
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.