STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4AZB1_LOTGIPDZ domain-containing protein. (94 aa)    
Predicted Functional Partners:
V3ZNF0_LOTGI
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.530
V4BV73_LOTGI
Uncharacterized protein.
    
 0.530
V4CDF6_LOTGI
Uncharacterized protein.
    
 0.520
V4ANB3_LOTGI
Uncharacterized protein.
    
 
 0.511
V3ZY28_LOTGI
Uncharacterized protein.
    
 0.510
V4B1Q1_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.508
V4A4M3_LOTGI
Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.505
V4AG81_LOTGI
Uncharacterized protein.
    
 
 0.502
V4C8W4_LOTGI
Uncharacterized protein.
    
 0.492
V4ARU7_LOTGI
Uncharacterized protein.
    
   0.475
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.