STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B581_LOTGIUncharacterized protein. (492 aa)    
Predicted Functional Partners:
V4A481_LOTGI
Uncharacterized protein.
    
 
 0.989
V4A291_LOTGI
Uncharacterized protein.
    
 
 0.966
V4A450_LOTGI
MIF4G domain-containing protein.
    
   0.859
V4AGD5_LOTGI
Uncharacterized protein.
    
 
 0.776
V4A6N0_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.643
V4AXG1_LOTGI
Importin N-terminal domain-containing protein.
    
 
 0.616
V4AS76_LOTGI
Uncharacterized protein.
   
 
 0.581
V4AVX3_LOTGI
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
  
 
 
 0.562
V4BI73_LOTGI
Nanos-type domain-containing protein; Belongs to the nanos family.
      
 0.540
V4B5V2_LOTGI
Uncharacterized protein.
   
 
 0.496
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.