STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4B6K6_LOTGIPWI domain-containing protein. (138 aa)    
Predicted Functional Partners:
V3ZPV5_LOTGI
Smg4_UPF3 domain-containing protein.
    
 0.981
V4AKT0_LOTGI
Cwf21 domain-containing protein.
   
 0.971
V4A5M0_LOTGI
Uncharacterized protein.
   
 0.966
V4B170_LOTGI
RRM domain-containing protein.
   
 0.944
V4B1H8_LOTGI
Uncharacterized protein.
    
 
 0.944
V4AZI7_LOTGI
RRM domain-containing protein.
    
 0.924
V3ZXV5_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.921
V4CIC0_LOTGI
MI domain-containing protein.
    
 0.913
V4A902_LOTGI
Uncharacterized protein.
   
 0.912
V4AAX5_LOTGI
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.912
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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