STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BIL1_LOTGIAlpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (306 aa)    
Predicted Functional Partners:
V3ZF12_LOTGI
Brix domain-containing protein.
   
 
 0.521
V4CLT1_LOTGI
Ribosomal_L18_c domain-containing protein.
    
 
 0.453
V4CH49_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.452
V4AU89_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.435
V4CN38_LOTGI
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.424
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.