STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4C7F6_LOTGIRab-GAP TBC domain-containing protein. (298 aa)    
Predicted Functional Partners:
V4AUD5_LOTGI
Uncharacterized protein.
   
 0.905
V4AR35_LOTGI
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
     
 0.848
V3Z105_LOTGI
Uncharacterized protein.
   
 0.767
V4BVB7_LOTGI
Uncharacterized protein.
     
 0.658
V4BB91_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.596
V4CE93_LOTGI
Rab-GAP TBC domain-containing protein.
     
 0.547
V4B3I3_LOTGI
UDENN domain-containing protein.
   
  
 0.542
V4BMD9_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.522
V3ZYR1_LOTGI
Rab-GAP TBC domain-containing protein.
      
 0.468
V4A862_LOTGI
Uncharacterized protein.
      
 0.465
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.