STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4C8W9_LOTGICyclic nucleotide-binding domain-containing protein. (476 aa)    
Predicted Functional Partners:
V3ZRE4_LOTGI
Cyclic nucleotide-binding domain-containing protein.
  
0.825
V4AXB6_LOTGI
Cyclic nucleotide-binding domain-containing protein.
  
0.823
V4B2R4_LOTGI
Cyclic nucleotide-binding domain-containing protein.
  
0.819
V4AJK2_LOTGI
Uncharacterized protein.
   
 0.814
V4BET2_LOTGI
Ion_trans domain-containing protein.
   
0.814
V4C7N1_LOTGI
Cyclic nucleotide-binding domain-containing protein.
  
0.758
V4A1K8_LOTGI
Ion_trans domain-containing protein.
   
0.751
V4CCP0_LOTGI
Cyclic nucleotide-binding domain-containing protein.
  
0.703
V4AX92_LOTGI
Cyclic nucleotide-binding domain-containing protein.
  
0.692
V4AX87_LOTGI
Uncharacterized protein.
   
 0.685
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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