STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA11677.1Choline dehydrogenase. (538 aa)    
Predicted Functional Partners:
SKA17002.1
Ankyrin repeat.
    
 0.873
SKA21585.1
Hypothetical protein.
    
 0.775
SJZ40585.1
Hypothetical protein.
    
 0.770
SKA00214.1
WD40 repeat.
    
  0.765
SJZ32723.1
Hypothetical protein.
    
 0.720
SKA01162.1
3-ketosteroid 9alpha-monooxygenase subunit B.
    
 0.697
SKA28326.1
Ferredoxin-NADP reductase.
    
 0.697
SJZ48286.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 
  0.645
SJZ53230.1
3-hydroxyisobutyryl-CoA hydrolase.
 
   
  0.635
SJZ42521.1
Tetratricopeptide repeat-containing protein.
    
  0.623
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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