STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swp_1554Response regulator receiver. (280 aa)    
Predicted Functional Partners:
swp_1553
Response regulator receiver.
 
    0.902
swp_4237
Sensory box protein, putative.
 
 
 0.782
swp_3274
Decaheme cytochrome c MtrF.
  
     0.719
swp_0896
Decaheme cytochrome c.
  
     0.708
swp_3196
Conserved hypothetical protein; IPR000719, Protein kinase; IPR011009, Protein kinase-like.
  
     0.707
swp_0721
Decaheme cytochrome c.
  
     0.675
swp_3273
Outer membrane protein, putative.
  
    0.657
swp_3460
Outer membrane protein.
  
     0.656
swp_1666
Tyrosine-specific protein phosphatase, putative.
  
     0.643
swp_2803
Conserved hypothetical protein.
  
     0.640
Your Current Organism:
Shewanella piezotolerans
NCBI taxonomy Id: 225849
Other names: S. piezotolerans WP3, Shewanella piezotolerans WP3, Shewanella piezotolerans str. WP3, Shewanella piezotolerans strain WP3, Shewanella sp. WP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.